Computational Biology group: Publications

[1]	A Geometrical Model for the SNP Motif Identification Problem Gaofeng Huang, Peter Jeavons In Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2007 pages 395-402. 2007. Details \| BibTeX \| Link \| DOI (10.1109/BIBE.2007.4375593)

[2]	An investigation into the role of the optical detection set-up in the recording of cardiac optical mapping signals: a Monte Carlo simulation study. Bishop MJ, Bub G, Garny A, Gavaghan D, Rodriguez B Physica D, 2009. Details \| BibTeX

[3]	Automatic analysis of agarose gel images P. S. Umesh Adiga, A. Bhomra, M. G. Turri, A. Nicod, S. R. Datta, Peter Jeavons, Richard Mott, Jonathan Flint Bioinformatics, Vol. 17, No. 11, pages 1084-1089. 2001. Details \| BibTeX \| Link

[4]

Characterization of the putative operon containing arylamine N-acetyltransferase (nat) in Mycobacterium bovis BCG

M. Anderton, S. Bhakta, G. Besra, P. Jeavons, L. Eltis, E. Sim

Molecular Microbiology, Vol. 59, No. 1, pages 181-192. 2006.

Details | BibTeX | Link | DOI (10.1111/j.1365-2958.2005.04945.x)

[5]	Enhancing the prediction of transcription factor binding sites by incorporating structural properties and nucleotide covariations S. Gunewardena, P. Jeavons, Z. Zhang Journal of Computational Biology, Vol. 13, No. 4, pages 929-945. 2006. Details \| BibTeX \| Link \| DOI (10.1089/cmb.2006.13.929)

[6]	Exact and Heuristic Approaches for Identifying Disease-Associated SNP Motifs Gaofeng Huang, Peter Jeavons and Dominic Kwiatkowski No. RR-05-03, Technical Report, Oxford University Computing Laboratory. July 2005. Details \| BibTeX \| Download (ps)

[7]

Exact and Heuristic Approaches for Identifying Disease-Associated SNP Motifs

Gaofeng Huang, Peter Jeavons and Dominic Kwiatkowski

In Proceedings of 5th Asia-Pacific Bioinformatics Conference, APBC 2007 Vol. 5 of Advances in Bioinformatics and Computational Biology, pages 175-184. Imperial College Press, 2007.

Details | BibTeX

[8]	Finding transcription factor binding sites in DNA Sequences: A template based approach Sumedha Gunewardena, Peter Jeavons No. RR-03-21, Technical Report, Oxford University Computing Laboratory. October 2003. Details \| BibTeX \| Download (ps)

[9]	Information categorisation in biological sequence alignments Sumedha Gunewardena, Peter Jeavons No. RR-04-24, Technical Report, Oxford University Computing Laboratory. November 2004. Details \| BibTeX \| Download (ps)